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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16037293_16038042_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
16037293 - 16038042

Intron Length:
750

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGAGAC

5'SS Class:
strong_major

3'SS Sequence:
ATATCATTTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ATCTTTTTAATA

Flanking Amino Acid:
LTKRLQGNPYSASQMVRWLK

Intron Amino Acid Position:
568

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.9
0.96
0.8
78.6
28.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
72.3
0.5
0.9
63.5
42.3

Minor 5ss
30.7
-2.2
3.3
40.8
45.7

Minor BPS
70.9
0.65
1.1
72.5
34

Associated Gene:

Gene:
WDR43

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16016544 - 16040527
23984

16016544 - 16040527
23984