Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_16038107_16038954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16038107 - 16038954

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TCCTTCTCCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

TAGTTAACAGCT

Flanking Amino Acid:

FTLHASYLSTLPDLIPQLGM

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

79.3

34.5

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

68.5

0.42

67.3

32.9

Minor 5ss

42.5

-0.8

2.8

60.5

37.7

Minor BPS

40.4

-0.6

2.1

59.64

43.1

Associated Gene:

Gene:

WDR43

Ensembl Gene ID:

ENSAPLG00000014314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035225

16016544 - 16040527

23984

ENSAPLT00000014997

16016544 - 16040527

23984