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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16069524_16070257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16069524 - 16070257

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTCTGATTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TTTGTCTGATTT

Flanking Amino Acid:

CGSRWTTEEEASLQSMLTSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

77.5

0.62

0.9

73.4

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

53.4

0.19

1.8

75.98

41.3

Associated Gene:

Gene:

TOGARAM2

Ensembl Gene ID:

ENSAPLG00000014230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044295

16052537 - 16099405

46869

ENSAPLT00000014818

16066435 - 16099405

32971

ENSAPLT00000044994

16060145 - 16099405

39261