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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16074254_16078028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16074254 - 16078028

Intron Length:

3775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CATATCTCATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GTATTCATATCT

Flanking Amino Acid:

KTEEKTLKSLELRTLEPILP

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

69.5

0.44

67.3

38.6

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

53.4

0.18

1.9

74.49

41.8

Associated Gene:

Gene:

TOGARAM2

Ensembl Gene ID:

ENSAPLG00000014230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044295

16052537 - 16099405

46869

ENSAPLT00000014818

16066435 - 16099405

32971

ENSAPLT00000044994

16060145 - 16099405

39261