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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16082267_16083892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16082267 - 16083892

Intron Length:

1626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

AATTGCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

ATTTTGGTAATT

Flanking Amino Acid:

DALAWLSSNDWQLKGKGLFS

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

62.4

0.31

32.1

Major PPT

75.8

0.58

0.9

70.8

40.1

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

48.6

-0

2.5

77.24

40.1

Associated Gene:

Gene:

TOGARAM2

Ensembl Gene ID:

ENSAPLG00000014230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044295

16052537 - 16099405

46869

ENSAPLT00000014818

16066435 - 16099405

32971

ENSAPLT00000044994

16060145 - 16099405

39261