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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16083999_16085809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16083999 - 16085809

Intron Length:

1811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

ATGACTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTATTCTAATA

Flanking Amino Acid:

HDVTLAVTKEVNNLRSKVSR

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

63.9

0.31

0.9

55.2

40.6

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

53.4

0.1

1.6

66.58

33.7

Associated Gene:

Gene:

TOGARAM2

Ensembl Gene ID:

ENSAPLG00000014230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044994

16060145 - 16099405

39261

ENSAPLT00000044295

16052537 - 16099405

46869

ENSAPLT00000014818

16066435 - 16099405

32971