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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16133409_16134816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16133409 - 16134816

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ACAACATTAAAT

Flanking Amino Acid:

LEHGANPAFRNDKGQIPVDV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.4

42.5

Major BPS

73.5

0.58

79.3

29.4

Major PPT

85.9

0.81

0.8

80.1

37.1

Minor 5ss

-1.4

3.3

47.2

48.2

Minor BPS

0.14

1.8

67.13

42.6

Associated Gene:

Gene:

CLIP4

Ensembl Gene ID:

ENSAPLG00000013533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037636

16126493 - 16148826

22334

ENSAPLT00000017935

16124227 - 16169726

45500

ENSAPLT00000014125

16124755 - 16148826

24072