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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16143805_16144234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16143805 - 16144234

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGATAA

5'SS Class:

major

3'SS Sequence:

TTCTCTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TTCTCTTGAACA

Flanking Amino Acid:

ASSVSSKISAGLYSSSSSTR

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

66.9

34.6

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

75.3

0.57

72.8

36.2

Minor 5ss

43.8

-0.7

2.9

56.1

48.1

Minor BPS

73.4

0.73

1.4

80.01

36.1

Associated Gene:

Gene:

CLIP4

Ensembl Gene ID:

ENSAPLG00000013533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037636

16126493 - 16148826

22334

ENSAPLT00000017935

16124227 - 16169726

45500

ENSAPLT00000014125

16124755 - 16148826

24072