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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16144370_16146169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16144370 - 16146169

Intron Length:

1800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTGCA

5'SS Class:

major

3'SS Sequence:

TTAAATCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTTAAAT

Flanking Amino Acid:

RFCGTTKFAPGFWCGIELDK

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

67.9

37.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.7

0.51

0.9

66.7

39.9

Minor 5ss

31.6

-2.1

3.3

41.6

44.9

Minor BPS

72.8

0.79

1.3

84.4

36.4

Associated Gene:

Gene:

CLIP4

Ensembl Gene ID:

ENSAPLG00000013533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037636

16126493 - 16148826

22334

ENSAPLT00000017935

16124227 - 16169726

45500

ENSAPLT00000014125

16124755 - 16148826

24072