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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16157950_16158521_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16157950 - 16158521

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTATGAGAT

5'SS Class:

major

3'SS Sequence:

TCGGCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTATGAGATCT

Flanking Amino Acid:

MDPPKNCPGPVYRIMTQCWQ

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.1

60.7

38.1

Major BPS

76.3

0.65

67.3

39.3

Major PPT

76.7

0.6

0.9

73.1

37.3

Minor 5ss

40.2

-1.1

3.5

56.1

48.1

Minor BPS

39.8

-0.7

2.4

66.23

44.1

Associated Gene:

Gene:

ALK

Ensembl Gene ID:

ENSAPLG00000013002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013578

16156104 - 16171775

15672