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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16161795_16162884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16161795 - 16162884

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TCTTCTCTCACT

Flanking Amino Acid:

QYLEENHFIHRDIAARNCLL

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

81.9

0.72

0.7

77.1

24.9

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

56.8

0.29

2.1

80.09

42.2

Associated Gene:

Gene:

ALK

Ensembl Gene ID:

ENSAPLG00000013002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013578

16156104 - 16171775

15672