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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16167118_16168524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16167118 - 16168524

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGTGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

TGATCCATTATT

Flanking Amino Acid:

LDFLMEALIISKFNHQNIVR

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

74.7

0.56

0.8

68.8

31.7

Minor 5ss

-1.1

2.7

50.1

46.4

Minor BPS

54.5

0.22

1.9

74.88

41.4

Associated Gene:

Gene:

ALK

Ensembl Gene ID:

ENSAPLG00000013002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013578

16156104 - 16171775

15672