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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16478188_16482236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16478188 - 16482236

Intron Length:

4049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

ACTTTTGTAATT

Flanking Amino Acid:

YGKKLTTKNVGKKIFHIIVF

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

80.3

32.2

Major BPS

78.6

0.71

78.6

Major PPT

88.5

0.87

0.6

88.4

21.3

Minor 5ss

38.1

-1.3

3.5

54.6

Minor BPS

54.3

0.21

72.81

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000771

16478134 - 16483109

4976