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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16542329_16542523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16542329 - 16542523

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGTGG

5'SS Class:

major

3'SS Sequence:

CTTTTGTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

GTCATGTGAACG

Flanking Amino Acid:

GVRGWSTWFVSPDYLRSAEM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

57.6

43.9

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

83.6

0.76

0.8

76.2

37.8

Minor 5ss

29.6

-2.3

3.3

37.8

Minor BPS

43.7

-0.6

2.2

49.2

44.3

Associated Gene:

Gene:

LBH

Ensembl Gene ID:

ENSAPLG00000009024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009379

16542219 - 16550519

8301