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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16542627_16550318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16542627 - 16550318

Intron Length:

7692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGGGCTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTCTCACAGACT

Flanking Amino Acid:

SPRKDGLSYQIFPDPSDFDC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

72.7

0.56

30.1

Major PPT

0.54

69.7

41.5

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

43.9

-0.3

2.2

64.89

45.6

Associated Gene:

Gene:

LBH

Ensembl Gene ID:

ENSAPLG00000009024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009379

16542219 - 16550519

8301