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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16607696_16608998_F

Intron Information:

Intron Rank:

130239

Intron Class:

major

Intron Phase:

Intron Coordinates:

16607696 - 16608998

Intron Length:

1303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGGCCA

5'SS Class:

major

3'SS Sequence:

TAATGCTTAGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTTCCTCTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

56.2

42.7

Major BPS

82.2

0.8

0.9

81.6

Major PPT

64.4

0.32

59.9

Minor 5ss

32.1

-2

3.6

43.4

44.1

Minor BPS

60.5

0.19

1.7

69.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038756

16601305 - 16609059

7755