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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16718230_16718795_F

Intron Information:

Intron Rank:

130436

Intron Class:

major

Intron Phase:

Intron Coordinates:

16718230 - 16718795

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCATGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTTTTCCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.6

38.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.2

0.73

0.8

78.8

28.9

Minor 5ss

-1.8

2.9

40.9

39.4

Minor BPS

48.4

-0.2

62.38

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035819

16717250 - 16719131

1882