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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16734581_16737466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16734581 - 16737466

Intron Length:

2886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CTCTGCTCTACA

Flanking Amino Acid:

YELKSAIQTSGLAINEQILH

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

73.3

37.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

78.9

0.65

0.8

72.1

32.7

Minor 5ss

40.6

-1.1

2.7

45.4

Minor BPS

45.6

-0.3

2.3

59.23

46.4

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766