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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16738612_16740173_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

16738612 - 16740173

Intron Length:

1562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACTAAATGCACAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CAGTTCTTAACT

Flanking Amino Acid:

SCRGILALMDTNANGRLTLQ

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

58.2

0.18

1.1

50.1

42.1

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

75.4

0.88

1.2

80.47

41.5

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766