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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16741292_16742348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16741292 - 16742348

Intron Length:

1057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTGTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGCATTTTATT

Flanking Amino Acid:

KAIFLRYAKQGSSIDASQLR

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

75.1

37.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

69.6

0.44

41.1

Minor 5ss

44.4

-0.6

3.2

64.2

47.3

Minor BPS

49.3

0.03

1.8

70.01

41.1

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766