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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16743546_16744699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16743546 - 16744699

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGATAA

5'SS Class:

major

3'SS Sequence:

AATCGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATCCATTTAATC

Flanking Amino Acid:

RIFLKNECYNENSDSQISPM

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

67.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

77.6

0.62

0.9

73.6

40.9

Minor 5ss

38.5

-1.3

43.8

44.6

Minor BPS

56.7

0.19

1.5

62.94

36.7

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766