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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16747818_16749863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16747818 - 16749863

Intron Length:

2046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAATAAAT

5'SS Class:

major

3'SS Sequence:

AACGCTTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTACTACTAATA

Flanking Amino Acid:

LSTGRNNSSLAGAVSKNPKY

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

73.9

36.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

69.3

0.43

0.9

65.4

40.1

Minor 5ss

35.7

-1.6

3.1

50.5

45.6

Minor BPS

-0.1

1.9

63.62

36.1

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766