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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16750940_16752321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16750940 - 16752321

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGGCCT

5'SS Class:

major

3'SS Sequence:

TTCCTGTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ACTTTGTTGATT

Flanking Amino Acid:

RGEWKGPWSDNSPEWNYVEP

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.4

41.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

80.4

0.68

0.8

33.4

Minor 5ss

41.2

-1

3.3

57.3

41.3

Minor BPS

52.5

0.16

2.1

71.97

39.8

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766