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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16753497_16754453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16753497 - 16754453

Intron Length:

957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

CACCCTTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TGTATTTTCACC

Flanking Amino Acid:

CMMGCSTSGQMRNTELRNGI

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

72.2

39.5

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

78.1

0.63

0.8

32.1

Minor 5ss

29.1

-2.4

2.8

35.6

Minor BPS

54.2

0.11

1.8

67.05

38.7

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766