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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16754629_16756369_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16754629 - 16756369

Intron Length:

1741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAATATA

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GGACCGCTAACT

Flanking Amino Acid:

WPSLLEKAYAKLRGSYQNLH

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

83.2

28.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

40.4

-1.1

2.9

39.8

Minor BPS

45.8

-0.2

2.3

65.33

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766