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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16756504_16758949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16756504 - 16758949

Intron Length:

2446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

SDYAGIFHFRFWQFGDWMDV

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

35.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

47.3

-0.3

2.5

60.3

44.3

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009585

16728608 - 16785373

56766

ENSAPLT00000020921

16728676 - 16770285

41610