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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16759069_16759872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16759069 - 16759872

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

ATGTACTGGATT

Flanking Amino Acid:

SRFDIIQGLIGDCWVLAALG

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

84.8

28.2

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

72.6

0.51

76.1

26.5

Minor 5ss

40.3

-1.1

3.3

55.3

48.9

Minor BPS

52.5

0.16

1.7

70.97

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766