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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16759943_16767989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16759943 - 16767989

Intron Length:

8047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTTAT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CTGTTCTCAGCA

Flanking Amino Acid:

LQQIEWRRPTELRRNPCLIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

73.4

33.2

Major BPS

0.52

1.5

79.6

35.6

Major PPT

91.4

0.93

0.6

84.6

30.4

Minor 5ss

39.3

-1.2

3.1

45.5

Minor BPS

50.4

0.01

1.8

62.88

43.7

Associated Gene:

Gene:

CAPN13

Ensembl Gene ID:

ENSAPLG00000009169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020921

16728676 - 16770285

41610

ENSAPLT00000009585

16728608 - 16785373

56766