Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_16799176_16805873_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16799176 - 16805873

Intron Length:

6698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGGATG

5'SS Class:

major

3'SS Sequence:

GGCAGGATCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CTTGGTTTCATA

Flanking Amino Acid:

WYLENVYPELRPNVCFPDIG

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

66.4

44.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

46.2

-0.2

1.1

33.6

39.7

Minor 5ss

42.4

-0.8

3.1

57.6

46.8

Minor BPS

44.7

-0.4

2.2

57.68

43.3

Associated Gene:

Gene:

GALNT14

Ensembl Gene ID:

ENSAPLG00000009654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040218

16798240 - 16840347

42108