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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16807613_16812794_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16807613 - 16812794

Intron Length:

5182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCACGCTTCTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTTAA

U12 Branch Point Sequence:

TGGCACTTAAGA

Flanking Amino Acid:

YVAASSDLRGVWWMQNIHCD

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

62.1

0.3

53.3

33.6

Major PPT

48.5

-0

1.7

56.8

38.5

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

51.9

0.06

1.9

62.81

42.9

Associated Gene:

Gene:

GALNT14

Ensembl Gene ID:

ENSAPLG00000009654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041137

16798240 - 16861091

62852

ENSAPLT00000010081

16798240 - 16839884

41645