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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16815992_16817700_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

16815992 - 16817700

Intron Length:

1709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAAGGTA

5'SS Class:

weak_major

3'SS Sequence:

GTGTTTCCTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TGGCAGCTGACG

Flanking Amino Acid:

PKVKCLRNRQPGLIRSRIQG

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.03

1.3

53.4

39.8

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

57.7

0.17

1.7

66.3

40.8

Minor 5ss

27.6

-2.6

3.6

32.1

43.1

Minor BPS

37.3

-1.1

2.3

42.81

Associated Gene:

Gene:

GALNT14

Ensembl Gene ID:

ENSAPLG00000009654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041137

16798240 - 16861091

62852

ENSAPLT00000010081

16798240 - 16839884

41645