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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16838052_16860959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16838052 - 16860959

Intron Length:

22908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

CTGTCTCTAATG

Flanking Amino Acid:

AAGPEGRTAEGSEADWDDLW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

82.2

0.8

0.9

81.6

Major PPT

70.7

0.47

64.8

41.4

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

54.4

-0

1.8

59.28

43.4

Associated Gene:

Gene:

GALNT14

Ensembl Gene ID:

ENSAPLG00000009654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041137

16798240 - 16861091

62852