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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16947487_16947926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16947487 - 16947926

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TATCCTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TATCCTTTAACA

Flanking Amino Acid:

LTTAVSVAAFKTGRPVRCML

Intron Amino Acid Position:

836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

85.1

25.6

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

77.6

0.62

0.9

73.4

35.5

Minor 5ss

46.5

-0.4

2.7

61.9

36.7

Minor BPS

79.4

0.92

1.1

82.29

31.8

Associated Gene:

Gene:

XDH

Ensembl Gene ID:

ENSAPLG00000010946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038749

16934732 - 16991557

56826

ENSAPLT00000027351

16936563 - 16980790

44228

ENSAPLT00000011511

16934732 - 16991557

56826