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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16953277_16955743_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16953277 - 16955743

Intron Length:

2467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAC

U12 Branch Point Sequence:

GGAAGAATAACT

Flanking Amino Acid:

VTSTKAHAKIISIDASEAQS

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

52.4

0.06

1.2

37.3

Major PPT

89.2

0.88

0.6

89.2

19.7

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

41.6

-0.5

2.1

58.13

43.4

Associated Gene:

Gene:

XDH

Ensembl Gene ID:

ENSAPLG00000010946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027351

16936563 - 16980790

44228

ENSAPLT00000011511

16934732 - 16991557

56826

ENSAPLT00000038749

16934732 - 16991557

56826