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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16957420_16957932_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16957420 - 16957932

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

GCTGTGTCACCT

Flanking Amino Acid:

ALKTCKELIGRDWNEKLLQD

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

86.6

0.82

0.8

81.1

30.9

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

39.3

-0.7

2.3

55.64

46.7

Associated Gene:

Gene:

XDH

Ensembl Gene ID:

ENSAPLG00000010946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027351

16936563 - 16980790

44228

ENSAPLT00000011511

16934732 - 16991557

56826

ENSAPLT00000038749

16934732 - 16991557

56826