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Intron Name: Anas_platyrhynchos_platyrhynchos_3_16961929_16962765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16961929 - 16962765

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTTAC

5'SS Class:

major

3'SS Sequence:

TCTTGCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

CTGCCATTGATC

Flanking Amino Acid:

SGSKLTLVSNEGKRTVTMDE

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

71.1

35.6

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

83.1

0.74

0.8

77.1

31.6

Minor 5ss

46.2

-0.4

2.6

57.9

42.1

Minor BPS

50.9

0.01

1.6

60.05

39.6

Associated Gene:

Gene:

XDH

Ensembl Gene ID:

ENSAPLG00000010946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038749

16934732 - 16991557

56826

ENSAPLT00000027351

16936563 - 16980790

44228

ENSAPLT00000011511

16934732 - 16991557

56826