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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17044316_17050490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17044316 - 17050490

Intron Length:

6175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAGGCTTAACT

Flanking Amino Acid:

KVIGRGAFGEVAVVKLKNAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.4

41.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.1

0.86

0.8

80.9

36.4

Minor 5ss

43.9

-0.7

2.8

58.1

46.5

Minor BPS

67.7

0.64

1.9

84.67

41.9

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282