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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17054740_17077329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17054740 - 17077329

Intron Length:

22590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

DSVHQLHYVHRDIKPDNILM

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.4

0.98

0.7

89.1

26.3

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282