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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17077424_17077952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17077424 - 17077952

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAGTAG

5'SS Class:

major

3'SS Sequence:

GTAACTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

TTGATTTTAGTC

Flanking Amino Acid:

SCLKLMEDGTVQSSVAVGTP

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

60.2

41.1

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

72.9

0.52

65.3

40.8

Minor 5ss

35.9

-1.6

3.4

46.6

48.8

Minor BPS

52.2

0.05

1.5

62.01

38.3

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282