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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17078154_17078734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17078154 - 17078734

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAGTGCA

5'SS Class:

major

3'SS Sequence:

CTTAATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTTATCTTAATT

Flanking Amino Acid:

ETYGKIMNHKERFQFPAQVT

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

69.9

34.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

72.1

0.5

1.1

75.3

38.3

Minor 5ss

-2.2

2.9

34.8

34.4

Minor BPS

74.5

0.85

1.2

83.96

37.3

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282