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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17091554_17094653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17091554 - 17094653

Intron Length:

3100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CTATCTTGAATG

Flanking Amino Acid:

ELESEVEGLKQKQVGRSPAV

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

1.1

77.3

37.8

Major BPS

74.6

0.61

65.6

41.4

Major PPT

78.2

0.64

0.9

76.9

37.3

Minor 5ss

32.7

-2

3.1

40.9

45.4

Minor BPS

59.2

0.15

1.5

60.74

41.7

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652