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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17112534_17113708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17112534 - 17113708

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCATTAAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAAAA

Flanking Amino Acid:

APTSALDQFEDSFSSSSSSL

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

100

1.24

0.5

100

Major PPT

63.1

0.3

59.9

39.5

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

74.7

0.77

1.6

86.42

31.4

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965