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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17113757_17118117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17113757 - 17118117

Intron Length:

4361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCTTTGTTAAAG

Flanking Amino Acid:

SSSLIDFMDDRSPSCIPANR

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

81.8

38.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

76.4

0.59

1.1

77.8

34.4

Minor 5ss

41.5

-0.9

3.1

58.6

39.2

Minor BPS

52.5

-0

2.2

63.72

44.3

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024735

17044163 - 17147444

103282