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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17113757_17121474_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17113757 - 17121474

Intron Length:

7718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

SSSLIDFMDDIDSVENFTLS

Intron Amino Acid Position:

916

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.8

0.65

0.8

70.7

40.5

Minor 5ss

41.5

-0.9

3.1

58.6

39.2

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965