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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17123541_17124263_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17123541 - 17124263

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCACAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

TAACCATCAAAT

Flanking Amino Acid:

GLIRQGCTCEVCGFSCHVTC

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.15

0.6

96.2

11.9

Major BPS

68.5

0.46

73.3

28.9

Major PPT

61.7

0.26

34.1

Minor 5ss

39.3

-1.2

2.8

50.9

45.5

Minor BPS

48.1

-0

1.9

67.51

41.8

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282

ENSAPLT00000027444

17044163 - 17146851

102689