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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17124401_17125035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17124401 - 17125035

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TATTTTGCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTGATCAGAATT

Flanking Amino Acid:

IGTAYEGHVRVPKPAGVKKG

Intron Amino Acid Position:

1064

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

35.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

71.1

0.48

1.1

71.5

38.4

Minor 5ss

41.6

-0.9

2.8

51.4

39.2

Minor BPS

49.2

0.02

1.7

70.26

40.7

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282