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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17125176_17125856_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17125176 - 17125856

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTCCATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTCCAATAATG

Flanking Amino Acid:

SVIVSQVIDMRDEEFSVSSV

Intron Amino Acid Position:

1110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

57.9

0.18

1.1

62.2

38.9

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

53.4

-0

1.9

67.5

39.7

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282