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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17129672_17131606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17129672 - 17131606

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

CATTCCATCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

ATATACTGAATC

Flanking Amino Acid:

LMWPATPSSCCYNAPYLSVY

Intron Amino Acid Position:

1429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

66.5

40.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

73.8

0.54

0.9

70.3

34.5

Minor 5ss

43.5

-0.7

2.8

62.6

Minor BPS

58.8

0.26

1.6

68.13

36.7

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000029538

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652