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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17131705_17133004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17131705 - 17133004

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTATTGTTAAAA

Flanking Amino Acid:

EWIQTIPLKKVRPLNTEGSL

Intron Amino Acid Position:

1462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

73.2

39.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

85.5

0.8

83.8

31.2

Minor 5ss

46.1

-0.4

2.6

62.1

42.6

Minor BPS

57.2

0.22

2.1

73.09

38.5

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652

ENSAPLT00000024735

17044163 - 17147444

103282

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000029538

17044163 - 17147444

103282

ENSAPLT00000027444

17044163 - 17146851

102689