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Intron Name: Anas_platyrhynchos_platyrhynchos_3_17145406_17146719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17145406 - 17146719

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TGTTACTTACTG

Flanking Amino Acid:

DAPTRDYEREDSDSPRHSTA

Intron Amino Acid Position:

1663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

0.56

0.9

68.6

37.3

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

56.5

0.07

1.9

65.08

42.9

Associated Gene:

Gene:

CDC42BPA

Ensembl Gene ID:

ENSAPLG00000012422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029538

17044163 - 17147444

103282

ENSAPLT00000013024

17044224 - 17148188

103965

ENSAPLT00000027444

17044163 - 17146851

102689

ENSAPLT00000025774

17044163 - 17147444

103282

ENSAPLT00000044732

17075793 - 17147444

71652

ENSAPLT00000040126

17044163 - 17147444

103282

ENSAPLT00000024735

17044163 - 17147444

103282